Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792452.1_cds_XP_016512376.1_2426
CDS Infomation

[gene=LOC107829424] [db_xref=GeneID:107829424] [protein=pentatricopeptide repeat-containing protein At2g01390] [protein_id=XP_016512376.1] [location=complement(join(12378..13381,20145..20916))] [gbkey=CDS]
Sequence

ATGTTTGCTACTCTTGGTACCCGACGGTTCTTCAACAAGCTCCAGCCTTTTCTGTGCTCC
TCTGTCAGTAGCTGTTCTTGGTTTAGCAGAATTATTATTAACCATGTACATTCCTTCGCG
CAATCCAAACAGAGGAGATCTGTCCGACAAGGTAATCGACCTGTGAGCAAGTCTACCAGA
TCAATTCAGAAACAAGACGTAGATCTCCCTAAAGTTTTCATGAGGGATACAATTACAAGA
ATATCACATATACTGAGATTTTCAAGTTGGGATTCTGCTCAAGAGCAGTTGATGGGGCTT
TCCATAAAATGGGATTCCTACACAGTTAATCAAGTTCTCAAGACTCATCCCCCTATGGAG
AAGGCCTGGTTGTTTTTCAATTGGGCCTCTAAGTTGAAAGGGTTTAAGCATGATCACTTT
ACCTACACGACTATGTTGGATATTTTTGGGGAAGCTGGGAGGATTTCGTCCATGAACTAT
ATATATAAGCAGATGCAAGACAAAGGAATCAAGATAGATGCAGTGACCTATACATCCCTT
CTTCACTGGCTTTCCAACCATGGGGACATTGATGGGTCAATTAAATTGTGGCAGGAGATG
AAAGATAAAGGATGTTTTCCTAATGTTGTTTCCTACACTGCATACATGAAAGTTTTATTT
GATCACAATCGAGTTAAGGAAGGAGCCAAGATATACAAGGAGATGCTTCAATCTGGTTGT
TCTCCCAACTGCCACACATACACTGTCCTCATGGAGCATCTTGCTGGTTCTGGAAAATTT
GATAGAGTTCTCGAGATTTTCAGTAAAATGCAAGATGCAGGGGTTCAACCAGATAAAGCT
GCATGCAACATTTTAGTGGAAAAATGCTGCAAAGCTGGGGAAACGCAAACAATGATGAAA
ATTCTTCACTACATGAAGGAGAAGTTTCTTGTTCTGCGTTATTCTGTCTATCAAGAGGCT
CTTCTCAAGTTGAAGATAGCTGGGGTGAGTGATCGGCTACTCAGGGATGTCAACCGTCAT
CTGTCCTTAGAAAAGTTCAACCATGATCAGATTGACAGATCATATGGAACCGCTGAAACT
ACTTGTCTCACTTTGGATGATAAGATGATTTTGTACTTGTTGAAGAAGCAAAGTCTTTTT
GCTGTTGATTACTTACTAGATAGCTTGATGAGTAAGCGTCTCAAATTGGATTCTGGAATA
GTGTCAACTATAGTTGAGGTAAACTGTAACCGTGGTAGAGTAAATGGTGCTTTTTTGGCC
TTTGAGTTCAGTGTGAAATTGGGCATAACCATTGAAAGAATTATGTATCTCATGTTGGTT
GGCGAACTTATTAGAACAAATTCACTTTCAAGGGTTGTGGACATTGTTGAAGCAGTGGTT
GGGGCAGGACTATCATTAGGGTCAGAACTAACTGCTCTTCTGATACATCGGCTTGGCTGC
ACTAGAGAGCCGACTTCTGCTGAAAAGTTATTTAGCATCTTACCTGATCAGCAGAAGAGT
ACTGCTGTATATACTGCTTTAATAAACACCTACTTCACTTGTGGCAATGCTGAGAAAGGA
CTTGAAATATTTGAGACCATGAGAAAGCGAGGGATAAATATGGCATTAAGTACTTACTGT
GTCCTATTGAATGGTCTTGAAAGAAATGGCTTATTTGATAAAGTACAATCTTATAGGAAA
GAAAAGAAGAAATTTAAATCTGAAAGCTGCACTACAGACATGTCTAACGAAGAAACAGTG
TGCGATCTTCTTTTTGCTGGAAACTTAGTGGTTTGA

Peptide Sequence

PEP ID

XP_016512376.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g01390 [Nicotiana tabacum]
Sequence

MFATLGTRRFFNKLQPFLCSSVSSCSWFSRIIINHVHSFAQSKQRRSVRQGNRPVSKSTR
SIQKQDVDLPKVFMRDTITRISHILRFSSWDSAQEQLMGLSIKWDSYTVNQVLKTHPPME
KAWLFFNWASKLKGFKHDHFTYTTMLDIFGEAGRISSMNYIYKQMQDKGIKIDAVTYTSL
LHWLSNHGDIDGSIKLWQEMKDKGCFPNVVSYTAYMKVLFDHNRVKEGAKIYKEMLQSGC
SPNCHTYTVLMEHLAGSGKFDRVLEIFSKMQDAGVQPDKAACNILVEKCCKAGETQTMMK
ILHYMKEKFLVLRYSVYQEALLKLKIAGVSDRLLRDVNRHLSLEKFNHDQIDRSYGTAET
TCLTLDDKMILYLLKKQSLFAVDYLLDSLMSKRLKLDSGIVSTIVEVNCNRGRVNGAFLA
FEFSVKLGITIERIMYLMLVGELIRTNSLSRVVDIVEAVVGAGLSLGSELTALLIHRLGC
TREPTSAEKLFSILPDQQKSTAVYTALINTYFTCGNAEKGLEIFETMRKRGINMALSTYC
VLLNGLERNGLFDKVQSYRKEKKKFKSESCTTDMSNEETVCDLLFAGNLVV

Transcript Sequence

Gene sequence data has not been registered.